Speeding genomic island discovery through systematic design of reference database composition.

Steven L YuCatherine M MageeneyFatema ShorminNoushin GhaffariKelly P Williams

Published in: PloS one (2024)

Runtime decreased dramatically with SMART DB design, with only minor losses of prophages. We also describe potential utility in other comparative genomics projects.

Keyphrases

small molecule
single cell
quality improvement
high throughput
copy number
emergency department
human health
risk assessment