High Proportion of Potential Candidates for Immunotherapy in a Chilean Cohort of Gastric Cancer Patients: Results of the FORCE1 Study.
Miguel Córdova-DelgadoMauricio P PintoIgnacio N RetamalMatías Muñoz-MedelMaría Loreto BravoMaría F FernándezBetzabé CisternasSebastián MondacaCésar SanchezHector GalindoBruno NerviCarolina IbáñezFrancisco AcevedoJorge MadridJosé PeñaErica KochMaria José MaturanaDiego RomeroNathaly de la JaraJaviera TorresManuel EspinozaCarlos BalmacedaYuwei LiaoZhiguang LiMatías FreireValentina Gárate-CalderónJavier CáceresGonzalo Sepúlveda-HermosillaRodrigo LizanaLiliana RamosRocío ArtigasEnrique NoreroFernando CrovariRicardo ArmisénAlejandro H CorvalánGareth I OwenMarcelo GarridoPublished in: Cancers (2019)
Gastric cancer (GC) is a heterogeneous disease. This heterogeneity applies not only to morphological and phenotypic features but also to geographical variations in incidence and mortality rates. As Chile has one of the highest mortality rates within South America, we sought to define a molecular profile of Chilean GCs (ClinicalTrials.gov identifier: NCT03158571/(FORCE1)). Solid tumor samples and clinical data were obtained from 224 patients, with subsets analyzed by tissue microarray (TMA; n = 90) and next generation sequencing (NGS; n = 101). Most demographic and clinical data were in line with previous reports. TMA data indicated that 60% of patients displayed potentially actionable alterations. Furthermore, 20.5% were categorized as having a high tumor mutational burden, and 13% possessed micro-satellite instability (MSI). Results also confirmed previous studies reporting high Epstein-Barr virus (EBV) positivity (13%) in Chilean-derived GC samples suggesting a high proportion of patients could benefit from immunotherapy. As expected, TP53 and PIK3CA were the most frequently altered genes. However, NGS demonstrated the presence of TP53, NRAS, and BRAF variants previously unreported in current GC databases. Finally, using the Kendall method, we report a significant correlation between EBV+ status and programmed death ligand-1 (PDL1)+ and an inverse correlation between p53 mutational status and MSI. Our results suggest that in this Chilean cohort, a high proportion of patients are potential candidates for immunotherapy treatment. To the best of our knowledge, this study is the first in South America to assess the prevalence of actionable targets and to examine a molecular profile of GC patients.
Keyphrases
- end stage renal disease
- epstein barr virus
- ejection fraction
- newly diagnosed
- chronic kidney disease
- prognostic factors
- diffuse large b cell lymphoma
- gene expression
- mass spectrometry
- peritoneal dialysis
- risk assessment
- cardiovascular disease
- electronic health record
- deep learning
- genome wide
- cardiovascular events
- high resolution
- machine learning
- single molecule
- patient reported
- simultaneous determination
- gas chromatography
- circulating tumor
- smoking cessation
- tandem mass spectrometry