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Design, synthesis and glycosidase inhibition of DAB derivatives with C-4 peptide and dipeptide branches.

Dong ZiYuna ShimadateJun-Zhe WangAtsushi KatoYi-Xian LiYue-Mei JiaGeorge W J FleetChu-Yi Yu
Published in: Organic & biomolecular chemistry (2023)
A series of DAB-peptide and DAB-dipeptide derivatives were synthesized from D-tartrate-derived nitrone 18. The DAB peptides 16 are derivatives of trans , trans -3,4-dihydroxy-L-proline. Glycosidase inhibition assay found four of them to be weak and selective bovine liver β-galactosidase inhibitors, and the C-2' methyl substituted compound 23b showed the most potent β-galactosidase inhibition (IC 50 = 0.66 μM). Molecular docking studies revealed different docking modes of compound 23b compared to those of other DAB-peptides, and partial similarity of compound 23b to DGJ.
Keyphrases
  • molecular docking
  • molecular dynamics simulations
  • structure activity relationship
  • high throughput
  • molecular dynamics
  • single cell
  • amino acid
  • protein protein
  • small molecule
  • case control