barCoder: a tool to generate unique, orthogonal genetic tags for qPCR detection.

Casey B BernhardsMatthew W LuxSarah E KatoskiTyler D P GoralskiAlvin T LiemHenry S Gibbons

Published in: BMC bioinformatics (2021)

The barCoder algorithm facilitates the generation of synthetically barcoded biological simulants by (a) eliminating the task of creating modules by hand, (b) minimizing optimization of PCR assays, and (c) reducing effort wasted on non-unique barcode modules.

Keyphrases

quantum dots
real time pcr
network analysis
machine learning
deep learning
high throughput
genome wide
loop mediated isothermal amplification
label free
copy number
gene expression
dna methylation