Viennamycins: Lipopeptides Produced by a Streptomyces sp.
Paulina BekieschMartin ZehlElizabeth Domingo-ContrerasJesús MartínInmaculada LlamasFernando ReyesArthur KaplanChristian RückertTobias BuscheJörn KalinowskiSergey B ZotchevPublished in: Journal of natural products (2020)
Extracts from Streptomyces sp. S4.7 isolated from the rhizosphere of edelweiss, an alpine medicinal plant, exhibited activity against Gram-positive bacteria. LC-HRMS analyses of the extracts resulted in the detection of two unknown, structurally related lipopeptides that were assumed to be responsible for the antibiotic activity. LC-MS guided isolation and structure elucidation of viennamycins A and B (1 and 2) by HR-MS/MS, 1D and 2D NMR, and Marfey's analyses revealed them to be novel compounds, with viennamycin A containing cysteic acid, a unique feature for lipopeptides. Tests for antibacterial, antifungal, and cytotoxic activities of purified viennamycins, both with and without divalent cations, did not reveal any bioactivity, suggesting that their biological function, which could not be determined in the tests used, is atypical for lipopeptides. The genome of Streptomyces sp. S4.7 was sequenced and analyzed, revealing the viennamycin biosynthetic gene cluster. Detailed bioinformatics-based analysis of the viennamycin gene cluster allowed elucidation of the biosynthetic pathway for these lipopeptides.
Keyphrases
- genome wide
- ms ms
- copy number
- dna methylation
- magnetic resonance
- microbial community
- high resolution
- genome wide identification
- candida albicans
- deep learning
- liquid chromatography tandem mass spectrometry
- label free
- high resolution mass spectrometry
- tandem mass spectrometry
- genome wide analysis
- liquid chromatography
- ultra high performance liquid chromatography
- quantum dots
- essential oil