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Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation.

Maren WehrsMitchell G ThompsonDeepanwita BanerjeeJan-Philip PrahlNorma M MorellaCarolina A BarcelosJadie MoonZak CostelloJay D KeaslingPatrick M ShihDeepti TanjoreAindrila Mukhopadhyay
Published in: Microbial cell factories (2020)
Our results demonstrate the feasibility of Bar-seq to assess fermentation associated stresses in yeast populations under industrial conditions and to understand critical stages of a scale-up process where variability emerges, and selection pressure gets imposed. Overall our work highlights a promising avenue to identify genetic loci and biological stress responses required for fitness under industrial conditions.
Keyphrases
  • saccharomyces cerevisiae
  • genome wide
  • wastewater treatment
  • heavy metals
  • dna methylation
  • rna seq
  • single cell
  • copy number
  • body composition
  • gene expression
  • genetic diversity