A new experimental evidence-weighted signaling pathway resource in FlyBase.
Helen AttrillGiulia AntonazzoJoshua L GoodmanJim ThurmondVictor B StreletsNicholas H Brownnull The FlyBase ConsortiumPublished in: Development (Cambridge, England) (2024)
Research in model organisms is central to the characterization of signaling pathways in multicellular organisms. Here, we present the comprehensive and systematic curation of 17 Drosophila signaling pathways using the Gene Ontology framework to establish a dynamic resource that has been incorporated into FlyBase, providing visualization and data integration tools to aid research projects. By restricting to experimental evidence reported in the research literature and quantifying the amount of such evidence for each gene in a pathway, we captured the landscape of empirical knowledge of signaling pathways in Drosophila.
Keyphrases
- signaling pathway
- pi k akt
- induced apoptosis
- epithelial mesenchymal transition
- healthcare
- copy number
- systematic review
- genome wide
- magnetic resonance
- gram negative
- electronic health record
- cell proliferation
- computed tomography
- gene expression
- genome wide identification
- big data
- transcription factor
- deep learning
- artificial intelligence
- network analysis