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Protein conformational changes and protonation dynamics probed by a single shot using quantum-cascade-laser-based IR spectroscopy.

Luiz SchubertPit LangnerDavid EhrenbergVictor A Lorenz-FonfriaJoachim Heberle
Published in: The Journal of chemical physics (2022)
Mid-IR spectroscopy is a powerful and label-free technique to investigate protein reactions. In this study, we use quantum-cascade-laser-based dual-comb spectroscopy to probe protein conformational changes and protonation events by a single-shot experiment. By using a well-characterized membrane protein, bacteriorhodopsin, we provide a comparison between dual-comb spectroscopy and our homebuilt tunable quantum cascade laser (QCL)-based scanning spectrometer as tools to monitor irreversible reactions with high time resolution. In conclusion, QCL-based infrared spectroscopy is demonstrated to be feasible for tracing functionally relevant protein structural changes and proton translocations by single-shot experiments. Thus, we envisage a bright future for applications of this technology for monitoring the kinetics of irreversible reactions as in (bio-)chemical transformations.
Keyphrases
  • single molecule
  • high resolution
  • molecular dynamics
  • protein protein
  • molecular dynamics simulations
  • label free
  • binding protein
  • energy transfer
  • mass spectrometry