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Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed.

Shao-Qiu XieBei ZhongBo-Qiang TongShou-Jin Fan
Published in: Mitochondrial DNA. Part B, Resources (2022)
Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that A. pekinense was clustered with A. inebrians .
Keyphrases
  • genome wide
  • arabidopsis thaliana
  • dna methylation
  • genome wide identification
  • bioinformatics analysis
  • genome wide analysis
  • gene expression
  • high resolution
  • transcription factor
  • binding protein