2-Amino-5-substituted-1,3,4-oxadiazole as chemosensor for Ni(II) ion detection: antifungal, antioxidant, DNA binding, and molecular docking studies.
Razia SultanaRizwan ArifManish RanaSaiema AhmediRabiya Mehandinull AkremaNikhat ManzoorRahis UddinPublished in: Luminescence : the journal of biological and chemical luminescence (2022)
An oxadiazole derivative 2 was prepared by condensation reaction through cyclization of semicarbazone in the presence of bromine; the structural confirmation was supported by 1 H and 13 C nuclear magnetic resonance (NMR) spectroscopy, Fourier transform-infrared spectroscopy, and liquid chromatography-mass spectrometry. Its sensing ability towards Ni 2+ ion was examined showing a binding constant of 1.04 × 10 5 compared with other suitable metal cations (Ca 2+ , Co 2+ , Cr 3+ , Ag + , Pb 2+ , Fe 3+ , Mg 2+ , and K + ) using ultraviolet-visible (UV-vis) and fluorescence spectroscopic studies. The minimum concentration of Ni 2+ ions and limit of detection was found to be 9.4 μM. A job's plot gave the binding stoichiometry ratio of oxadiazole derivative 2 vs Ni 2+ ions as 2:1. Furthermore, the intercalative binding mode of oxadiazole derivative 2 with calf thymus DNA was supported by ultraviolet-visible (UV-vis) and fluorescent light, viscosity, cyclic voltammetry, time-resolved fluorescence, and circular dichroism measurements. The molecular docking result gave the binding score for oxadiazole derivative 2 as -6.5 kcal/mol, which further confirmed the intercalative interaction. In addition, the antifungal activity of oxadiazole derivative 2 was also screened against several fungal strains (C. albicans, C. glabrata, and C. tropicalis) by broth dilution and disc diffusion methods. In antioxidant studies, the oxadiazole derivative 2 showed potential scavenging activity against 2,2-diphenyl-1-picrylhydrazyl and H 2 O 2 free radicals.
Keyphrases
- molecular docking
- dna binding
- liquid chromatography
- mass spectrometry
- water soluble
- aqueous solution
- molecular dynamics simulations
- magnetic resonance
- quantum dots
- candida albicans
- single molecule
- transcription factor
- metal organic framework
- oxidative stress
- label free
- case control
- high resolution mass spectrometry
- anti inflammatory
- binding protein
- magnetic resonance imaging
- escherichia coli
- energy transfer
- transition metal
- high resolution
- risk assessment
- ms ms
- computed tomography
- cell wall
- liquid chromatography tandem mass spectrometry
- cell free
- visible light
- circulating tumor cells