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Reductive Photocycloreversion of Cyclobutane Dimers Triggered by Guanines.

Gemma M Rodriguez-MuñizAna B Fraga-TimiraosMiriam Navarrete-MiguelAna Borrego-SánchezDaniel Roca-SanjuánMiguel A MirandaVirginie Lhiaubet-Vallet
Published in: The Journal of organic chemistry (2023)
The quest for simple systems achieving the photoreductive splitting of four-membered ring compounds is a matter of interest not only in organic chemistry but also in biochemistry to mimic the activity of DNA photorepair enzymes. In this context, 8-oxoguanine, the main oxidatively generated lesion of guanine, has been shown to act as an intrinsic photoreductant by transferring an electron to bipyrimidine lesions and provoking their cycloreversion. But, in spite of appropriate photoredox properties, the capacity of guanine to repair cyclobutane pyrimidine dimer is not clearly established. Here, dyads containing the cyclobutane thymine dimer and guanine or 8-oxoguanine are synthesized, and their photoreactivities are compared. In both cases, the splitting of the ring takes place, leading to the formation of thymine, with a quantum yield 3.5 times lower than that for the guanine derivative. This result is in agreement with the more favored thermodynamics determined for the oxidized lesion. In addition, quantum chemistry calculations and molecular dynamics simulations are carried out to rationalize the crucial aspects of the overall cyclobutane thymine dimer photoreductive repair triggered by the nucleobase and its main lesion.
Keyphrases
  • molecular dynamics simulations
  • molecular dynamics
  • molecular docking
  • monte carlo
  • drug discovery
  • circulating tumor
  • density functional theory
  • water soluble
  • single molecule
  • cell free
  • nucleic acid
  • quantum dots