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All-Atom Biomolecular Simulation in the Exascale Era.

Thomas L BeckPaolo CarloniDilipkumar N Asthagiri
Published in: Journal of chemical theory and computation (2024)
Exascale supercomputers have opened the door to dynamic simulations, facilitated by AI/ML techniques, that model biomolecular motions over unprecedented length and time scales. This new capability holds the potential to revolutionize our understanding of fundamental biological processes. Here we report on some of the major advances that were discussed at a recent CECAM workshop in Pisa, Italy, on the topic with a primary focus on atomic-level simulations. First, we highlight examples of current large-scale biomolecular simulations and the future possibilities enabled by crossing the exascale threshold. Next, we discuss challenges to be overcome in optimizing the usage of these powerful resources. Finally, we close by listing several grand challenge problems that could be investigated with this new computer architecture.
Keyphrases
  • molecular dynamics
  • monte carlo
  • mental health
  • artificial intelligence
  • deep learning
  • machine learning
  • climate change
  • electron transfer
  • virtual reality
  • high speed