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Description of Roseibium sediminicola sp. nov. Isolated from Sediment of a Tidal Flat on the Yellow Sea Coast.

Soyeon AhnVeeraya WeerawongwiwatYunjeong LeeDavid Hyung-Sun ChoiJong-Hwa KimJung-Hoon YoonJung-Sook LeeAmpaitip SukhoomWonyong Kim
Published in: Current microbiology (2024)
A Gram-stain-negative, aerobic, rod-shaped, motile, flagellated bacterial strain, designated as CAU 1639 T , was isolated from the tidal flat sediment on the Yellow Sea in the Republic of Korea. Growth of the isolate was observed at 20-37 °C, at pH 5.0-10.5 and with 0-7% (w/v) NaCl. The genomic DNA G + C content was 60.8%. Phylogenetic analysis, grounded on 16S rRNA gene sequencing, revealed that strain CAU 1639 T was closely related to species within the genus Roseibium. It shared the highest similarity with Roseibium album CECT 5095 T , followed by Roseibium aggregatum IAM 12614 T and Roseibium salinum Cs25 T , with 16S rRNA gene sequence similarity ranging from 98.0-98.4%. It was observed that the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values ranged between 72.5-79.5 and 20.0-22.9%, respectively. The polyphasic taxonomic analysis reveals that strain CAU 1639 T represents a novel species in the genus Roseibium with the proposed name Roseibium sediminicola sp. nov. The type strain is CAU 1639 T (= KCTC 82430 T  = MCCC 1K06081 T ).
Keyphrases
  • circulating tumor
  • single molecule
  • cell free
  • copy number
  • heavy metals
  • nucleic acid
  • single cell
  • genome wide
  • carbon dioxide
  • high intensity
  • genetic diversity