A fully automated pipeline for quantitative genotype calling from next generation sequencing data in autopolyploids.

Guilherme S PereiraAntonio Augusto F GarciaGabriel Rodrigues Alves Margarido

Published in: BMC bioinformatics (2018)

We demonstrate that our approach can help plant geneticists working with autopolyploid species to advance their studies by distinguishing allele dosage from GBS data.

Keyphrases

electronic health record
big data
machine learning
deep learning
high resolution
copy number
gene expression
data analysis
dna methylation
case control