Comparing Genetic Risk and Clinical Risk Classification in Luminal-like Breast Cancer Patients Using a 23-Gene Classifier.
Chi-Cheng HuangTing-Hao ChenLiang-Chih LiuChiun-Sheng HuangJi-An LiangYu-Chen HsuChia-Ming HsiehSean-Lin HuangKuan-Hui ShihLing-Ming TsengPublished in: Cancers (2022)
Background: A 23-gene classifier has been developed based on gene expression profiles of Taiwanese luminal-like breast cancer. We aim to stratify risk of relapse and identify patients who may benefit from adjuvant chemotherapy based on genetic model among distinct clinical risk groups. Methods: There were 248 luminal (hormone receptor-positive and human epidermal growth factor receptor II-negative) breast cancer patients with 23-gene classifier results. Using the modified Adjuvant! Online definition, clinical high/low-risk groups were tabulated with the genetic model. The primary endpoint was a recurrence-free interval (RFI) at 5 years. Results: There was a significant difference between the high/low-risk groups defined by the 23-gene classifier for the 5-year prognosis of recurrence (16 recurrences in high-risk and 3 recurrences in low-risk; log-rank test: p < 0.0001). Among the clinically high-risk group, the 5-year RFI of high risk defined by the 23-gene classifier was significantly higher than that of the low-risk group (15 recurrences in high-risk and 2 recurrences in low-risk; log-rank test: p < 0.0001). Conclusion: This study showed that 23-gene classifier can be used to stratify clinically high-risk patients into distinct survival patterns based on genomic risks and displays the potentiality to guide adjuvant chemotherapy. The 23-gene classifier can provide a better estimation of breast cancer prognosis which can help physicians make a better treatment decision.
Keyphrases
- copy number
- genome wide
- gene expression
- epidermal growth factor receptor
- dna methylation
- genome wide identification
- endothelial cells
- early stage
- free survival
- ejection fraction
- deep learning
- transcription factor
- social media
- newly diagnosed
- advanced non small cell lung cancer
- genome wide analysis
- patient reported outcomes
- induced pluripotent stem cells
- human health