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lionessR: single sample network inference in R.

Marieke Lydia KuijjerPing-Han HsiehJohn QuackenbushKimberly Glass
Published in: BMC cancer (2019)
We developed lionessR, an open source R package to model single sample networks. We show how lionessR can be used to inform us on potential precision medicine applications in cancer. The lionessR package is a user-friendly tool to perform such analyses. The package, which includes a vignette describing the application, is freely available at: https://github.com/kuijjerlab/lionessR and at: http://bioconductor.org/packages/lionessR .
Keyphrases
  • papillary thyroid
  • squamous cell carcinoma
  • network analysis