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Association of Aberrant DNA Methylation Level in the CD4 and JAK-STAT-Pathway-Related Genes with Mastitis Indicator Traits in Chinese Holstein Dairy Cattle.

Tahir UsmanNawab AliYachun WangYing Yu
Published in: Animals : an open access journal from MDPI (2021)
The present study was designed to evaluate the gene expression and DNA methylation level in the promoter region of the CD4 and the JAK-STAT-pathway-related genes. A total of 24 samples were deployed in the gene expression and 118 samples were used in the DNA methylation study. Student's t -tests were used to analyze the gene expression and DNA methylation. The evaluation of DNA methylation in promoter regions of JAK2 and STAT 5A revealed hypo-methylation levels of CpG sites and higher gene expression in cows diagnosed with mastitis as compared to the healthy control, and vice versa in those with CD4 . DNA methylation was negatively correlated with gene expression in JAK2 , STAT 5A , and CD4 genes. Six, two, and four active transcription factors were identified on the CpG sites in the promoter regions of JAK2 , STAT 5A , and CD4 genes, respectively. Regarding correlation analysis, the DNA methylation levels of CD4 showed significantly higher positive correlations with somatic cell counts ( p < 0.05). Findings of the current study inferred that aberrant DNA methylation in the CpG sites at the 1 kb promoter region in JAK2 , STAT 5A , and CD4 genes due to mastitis in cows can be used as potential epigenetic markers to estimate bovine mastitis susceptibility in dairy cattle.
Keyphrases
  • dna methylation
  • gene expression
  • genome wide
  • copy number
  • nk cells
  • transcription factor
  • cell proliferation
  • bone marrow
  • climate change
  • cell therapy
  • genome wide identification
  • genome wide analysis