Insights into the genomic repertoire of Aquimarina litoralis CCMR20, a symbiont of coral Mussismilia braziliensis.
Tooba VarastehDiogo TschoekeGizele GarciaArthur Silva LimaAna Paula B MoreiraCristiane ThompsonFabiano Lopes ThompsonPublished in: Archives of microbiology (2021)
Aquimarina litoralis CCMR20 originated from the coral Mussismilia braziliensis (Sebastião Gomes Reef, Brazil, summer 2010). To gain new insights into the genomic repertoire associated with symbioses, we obtained the genome sequence of this strains using Illumina sequencing. CCMR20 has a genome size of 6.3 Mb, 32.6%GC, and 5513 genes (37 tRNA and 4 rRNA). A more fine-grained examination of the gene repertoire of CCMR20 disclosed genes engaged with symbiosis (heterotrophic carbon metabolism, CAZymes, B-vitamins group, carotenoid pigment and antioxidant molecules production). Genomic evidence further expand the possible relevance of this symbiont in the health of Mussismilia holobiont.Whole Genome Shotgun project has been deposited at DDBJ/ENA/GeneBank under the accession number WEKL00000000.
Keyphrases
- genome wide
- copy number
- high throughput sequencing
- genome wide identification
- dna methylation
- healthcare
- public health
- mental health
- genome wide analysis
- escherichia coli
- bioinformatics analysis
- oxidative stress
- single cell
- molecular dynamics
- air pollution
- transcription factor
- health information
- risk assessment
- gene expression
- heat stress
- anti inflammatory
- social media
- human health
- mass spectrometry
- climate change
- solid phase extraction