Naphthoquinones biflorin and bis-biflorin ( Capraria biflora ) as possible inhibitors of the fungus Candida auris polymerase: molecular docking, molecular dynamics, MM/GBSA calculations and in silico drug-likeness study.
Aluísio Marques da FonsecaNeidelênio Baltazar SoaresRegilany Paulo ColaresMauro Macêdo de OliveiraLarissa Santos OliveiraGabrielle Silva MarinhoMira Raya Paula de LimaMatheus Nunes da RochaHélcio Silva Dos SantosEmanuelle Machado MarinhoPublished in: Journal of biomolecular structure & dynamics (2023)
A new worldwide concern has emerged with the recent emergence of infections caused by Candida auris . This reflects its comparative ease of transmission, substantial mortality, and the increasing level of resistance seen in the three major classes of antifungal drugs. Efforts to create a better design for structure-based drugs that described numerous modifications and the search for secondary metabolic structures derived from plant species are likely to reduce the virulence of several fungal pathogens. In this context, the present work aimed to evaluate in silico two naphthoquinones isolated from the roots of Capraria biflora , biflorin, and its dimmer, bis-biflorin, as potential inhibitors of Candida auris polymerase. Based on the simulation performed with the two naphthoquinones, biflorin and bis-biflorin, it can be stated that bis-biflorin showed the best interactions with Candida auris polymerase. Still, biflorin also demonstrated favorable coupling energy. Predictive pharmacokinetic assays suggest that biflorin has high oral bioavailability and more excellent metabolic stability compared to the bis-biflorin analogue. constituting a promising pharmacological tool.Communicated by Ramaswamy H. Sarma.
Keyphrases
- molecular docking
- molecular dynamics
- candida albicans
- ionic liquid
- biofilm formation
- molecular dynamics simulations
- density functional theory
- pseudomonas aeruginosa
- escherichia coli
- staphylococcus aureus
- type diabetes
- cystic fibrosis
- cardiovascular disease
- high throughput
- antimicrobial resistance
- drug induced
- mass spectrometry
- gram negative
- human health