Genome-wide association reveals host-specific genomic traits in Escherichia coli.

Sumeet K TiwariBoas C L van der PuttenThilo M FuchsTrung N VinhMartin BootsmaRik OldenkampRoberto La RagioneSebastien MatamorosNgo T HoaChristian BerensJoy LengJulio ÁlvarezMarta Ferrandis-VilaJenny M RitchieAngelika FruthStefan SchwarzLucas DomínguezMaría Ugarte-RuizAstrid BetheCharlotte HuberVanessa JohannsIvonne StammLothar H WielerChrista EwersAmanda Fivian-HughesHerbert SchmidtChristian MengeTorsten SemmlerConstance Schultsz

Published in: BMC biology (2023)

This study provides an extensive analysis of genetic determinants which may contribute to host specificity in E. coli. Our findings should inform risk analysis and epidemiological monitoring of (antimicrobial resistant) E. coli.

Keyphrases

escherichia coli
genome wide association
genome wide
copy number
staphylococcus aureus
biofilm formation
dna methylation
klebsiella pneumoniae
pseudomonas aeruginosa
gene expression
cystic fibrosis
structural basis