scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data.

Ji-Hye ChoiHye In KimHyun Goo Woo

Published in: BMC bioinformatics (2020)

scTyper provides a comprehensive and user-friendly analysis pipeline for cell typing of scRNA-seq data with a curated cell marker database, scTyper.db.

Keyphrases

single cell
rna seq
high throughput
cell therapy
stem cells
big data
emergency department
machine learning
genetic diversity
data analysis