The genome sequence of the brown trout, Salmo trutta Linnaeus 1758.

Tom Johnny HansenPer Gunnar FjelldalSigbjørn LienMichelle SmithCraig CortonKaren OliverJason SkeltonEmma BetteridgeJale Doulcan Doulcan Olivier Fedrigo Jacquelyn MountcastleErich JarvisShane A McCarthyWilliam ChowKerstin Howe James W Torrance Jonathan M D WoodYing SimsLeanne HaggertyRichard Challis Jonathan Threlfall Daniel Mead Richard Durbin Mark L Blaxter

Published in: Wellcome open research (2021)

We present a genome assembly from an individual female Salmo trutta (the brown trout; Chordata; Actinopteri; Salmoniformes; Salmonidae). The genome sequence is 2.37 gigabases in span. The majority of the assembly is scaffolded into 40 chromosomal pseudomolecules. Gene annotation of this assembly on Ensembl has identified 43,935 protein coding genes.

Keyphrases

genome wide
copy number
genome wide identification
dna methylation
amino acid
small molecule
rna seq
protein protein
transcription factor
binding protein