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Evaluating spatially variable gene detection methods for spatial transcriptomics data.

Carissa ChenHani Jieun KimPengyi Yang
Published in: Genome biology (2024)
Our study evaluates the performance of each method from multiple aspects and highlights the discrepancy among different methods when calling statistically significant SVGs across diverse datasets. Overall, our work provides useful considerations for choosing methods for identifying SVGs and serves as a key reference for the future development of related methods.
Keyphrases
  • single cell
  • genome wide
  • rna seq
  • machine learning
  • dna methylation