Revealing novel biomarkers for diagnosing chronic kidney disease in pediatric patients.
Sandra Benito CidNora UncetaMaciejczyk MateuszAlicia Sánchez-OrtegaKatarzyna Taranta-JanuszJulita SzulimowskaMateusz MaciejczykFernando AndradeAlberto Gómez-CaballeroPaweł DubielaRamón José BarrioPublished in: Scientific reports (2024)
Pediatric chronic kidney disease (CKD) is a clinical condition characterized by progressive renal function deterioration. CKD diagnosis is based on glomerular filtration rate, but its reliability is limited, especially at the early stages. New potential biomarkers (citrulline (CIT), symmetric dimethylarginine (SDMA), S-adenosylmethionine (SAM), n-butyrylcarnitine (nC4), cis-4-decenoylcarnitine, sphingosine-1-phosphate and bilirubin) in addition to creatinine (CNN) have been proposed for early diagnosis. To verify the clinical value of these biomarkers we performed a comprehensive targeted metabolomics study on a representative cohort of CKD and healthy pediatric patients. Sixty-seven children with CKD and forty-five healthy children have been enrolled in the study. Targeted metabolomics based on liquid chromatography-triple quadrupole mass spectrometry has been used for serum and plasma samples analysis. Univariate data analysis showed statistically significant differences (p < 0.05) in the concentration of CNN, CIT, SDMA, and nC4 among healthy and CKD pediatric patients. The predictive ability of the proposed biomarkers was also confirmed through specificity and sensitivity expressed in Receiver Operating Characteristic curves (AUC = 0.909). In the group of early CKD pediatric patients, AUC of 0.831 was obtained, improving the diagnostic reliability of CNN alone. Moreover, the models built on combined CIT, nC4, SDMA, and CNN allowed to distinguish CKD patients from healthy control regardless of blood matrix type (serum or plasma). Our data demonstrate potential biomarkers in the diagnosis of early CKD stages.
Keyphrases
- chronic kidney disease
- end stage renal disease
- mass spectrometry
- liquid chromatography
- data analysis
- convolutional neural network
- young adults
- multiple sclerosis
- high performance liquid chromatography
- high resolution mass spectrometry
- tandem mass spectrometry
- high resolution
- simultaneous determination
- peritoneal dialysis
- metabolic syndrome
- uric acid
- artificial intelligence
- deep learning
- prognostic factors
- patient reported outcomes