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High-speed automatic characterization of rare events in flow cytometric data.

Yuan QiYouhan FangDavid R SinclairShangqin GuoMeritxell Alberich-JordaJun LuDaniel G TenenMichael G KharasSaumyadipta Pyne
Published in: PloS one (2020)
A new computational framework for FLow cytometric Analysis of Rare Events (FLARE) has been developed specifically for fast and automatic identification of rare cell populations in very large samples generated by platforms like multi-parametric flow cytometry. Using a hierarchical Bayesian model and information-sharing via parallel computation, FLARE rapidly explores the high-dimensional marker-space to detect highly rare populations that are consistent across multiple samples. Further it can focus within specified regions of interest in marker-space to detect subpopulations with desired precision.
Keyphrases
  • high speed
  • flow cytometry
  • machine learning
  • atomic force microscopy
  • cell therapy
  • high resolution
  • electronic health record
  • social media
  • bone marrow
  • genetic diversity
  • single molecule
  • bioinformatics analysis