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An open source pipeline for quantitative immunohistochemistry image analysis of inflammatory skin disease using artificial intelligence.

Yuchun DingGaurav DhawanClaire J JonesThomas NessEsme NicholsNatalio KrasnogorNick J Reynolds
Published in: Journal of the European Academy of Dermatology and Venereology : JEADV (2022)
The application of two DL models in sequence facilitates accurate segmentation of epidermal and dermal structures, exclusion of common artefacts and enables the quantitative analysis of the immunostained signal. However, inaccurate annotation of the slides for training the DL model can decrease the accuracy of the output. Our open source code will facilitate further external validation across different immunostaining platforms and slide scanners.
Keyphrases
  • artificial intelligence
  • high resolution
  • deep learning
  • wound healing
  • machine learning
  • big data
  • convolutional neural network
  • oxidative stress
  • mass spectrometry
  • amino acid