Dementia with Lewy bodies post-mortem brains reveal differentially methylated CpG sites with biomarker potential.
XiaoJian ShaoSangeetha VishweswaraiahMiroslava Čuperlović-CulfAli YilmazCelia M T GreenwoodAnuradha SurendraBernadette McGuinnessPeter PassmorePatrick Gavin KehoeMichael E MaddensSteffany A L BennettBrian D GreenUppala RadhakrishnaStewart Francis GrahamPublished in: Communications biology (2022)
Dementia with Lewy bodies (DLB) is a common form of dementia with known genetic and environmental interactions. However, the underlying epigenetic mechanisms which reflect these gene-environment interactions are poorly studied. Herein, we measure genome-wide DNA methylation profiles of post-mortem brain tissue (Broadmann area 7) from 15 pathologically confirmed DLB brains and compare them with 16 cognitively normal controls using Illumina MethylationEPIC arrays. We identify 17 significantly differentially methylated CpGs (DMCs) and 17 differentially methylated regions (DMRs) between the groups. The DMCs are mainly located at the CpG islands, promoter and first exon regions. Genes associated with the DMCs are linked to "Parkinson's disease" and "metabolic pathway", as well as the diseases of "severe intellectual disability" and "mood disorders". Overall, our study highlights previously unreported DMCs offering insights into DLB pathogenesis with the possibility that some of these could be used as biomarkers of DLB in the future.
Keyphrases
- dna methylation
- genome wide
- mild cognitive impairment
- intellectual disability
- copy number
- gene expression
- cognitive impairment
- cognitive decline
- autism spectrum disorder
- parkinson disease
- bipolar disorder
- human health
- white matter
- current status
- physical activity
- risk assessment
- deep brain stimulation
- subarachnoid hemorrhage