SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment.

Clarisse MarotzPedro Belda-FerreFarhana AliPromi DasShi HuangKalen CantrellLingjing JiangCameron MartinoRachel E DinerGibraan RahmanDaniel McDonaldGeorge ArmstrongSho KoderaSonya DonatoGertrude Ecklu-MensahNeil GottelMariana C Salas GarciaLeslie Y ChiangRodolfo A SalidoJustin P ShafferMac Kenzie BryantKarenina SandersGreg HumphreyGail AckermannNiina HaiminenKristen L BeckHo-Cheol KimAnna Paola CarrieriLaxmi ParidaYoshiki Vázquez-BaezaFrancesca J TorrianiRob KnightJack GilbertDaniel A SweeneySarah M Allard

Published in: Microbiome (2021)

These results contextualize the vast diversity of microbial niches where SARS-CoV-2 RNA is detected and identify specific bacterial taxa that associate with the viral RNA prevalence both in the host and hospital environment. Video Abstract.

Keyphrases

sars cov
end stage renal disease
respiratory syndrome coronavirus
healthcare
ejection fraction
newly diagnosed
chronic kidney disease
prognostic factors
microbial community
peritoneal dialysis
adverse drug
electronic health record
sensitive detection