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The importance of tetrel bonding interactions with carbon in two arrestive iso-structural Cd(ii)-Salen coordination complexes: a comprehensive DFT overview in crystal engineering.

Dhrubajyoti MajumdarSourav RoyAntonio Frontera
Published in: RSC advances (2022)
In this article, we describe the serendipitous synthesis of two remarkable iso-structural Cd(ii)-Salen complexes [L 2 Cd 4 (OAc) 2 (NCS) 2 ] in the presence of H 2 L and NaSCN {where L = L 1 ( N , N '-bis(3-methoxysalicylidene)-1,2-diaminopropane) and L = L 2 ( N , N '-bis(3-methoxysalicylidene)-ethylenediamine) in 1 and 2, respectively}. The complexes were characterized by using elemental analysis, SEM-EDX, PXRD, spectroscopy, and X-ray crystallography. The X-ray crystal structure revealed that both complexes crystallize in the orthorhombic space group Pbcn , with unit cell parameters: a = 20.758(6), b = 11.022(3), c = 21.396(6) Å, V = 4895(2) Å 3 , and Z = 4. The inner N 2 O 2 and outer O 4 compartments are essentially occupied by two different Cd(ii) metal ions resulting from the de-protonated form of the ligand (L 2- ) with the Cd(1) metal ions adopting a capped octahedral geometry. At the same time, Cd(2) assumes a distorted trigonal prismatic geometry. The solid-state crystal structure involves various non-covalent supramolecular interactions delineated by Hirshfeld Surface and 2D fingerprint plot analysis. Noteworthily, interesting S⋯H, O⋯H, and N⋯H contacts were observed, which have identical percentages in both complexes. The sparse tetrel bonding interactions in the complex, involving the CH 3 group, were evaluated in a new dimension of DFT. We observed this privileged bonding landscape that leads to the formation of self-assembled dimers in the crystal complexes. DFT-based MEP, RDG surface, NBO, and QTAIM/NCI plot investigation quantified such unique tetrel bonding interactions.
Keyphrases
  • crystal structure
  • solid state
  • nk cells
  • high resolution
  • molecular docking
  • quantum dots
  • density functional theory
  • mass spectrometry
  • ionic liquid
  • computed tomography
  • cell therapy
  • room temperature
  • molecular dynamics