Phenylboronic Acids Probing Molecular Recognition against Class A and Class C β-lactamases.
Pasquale LincianoMattia VicarioIvana KekezPierangelo BellioGiuseppe CelenzaIsabel Martín-BlecuaJesús BlázquezLaura CendronDonatella TondiPublished in: Antibiotics (Basel, Switzerland) (2019)
Worldwide dissemination of pathogens resistant to almost all available antibiotics represent a real problem preventing efficient treatment of infectious diseases. Among antimicrobial used in therapy, β-lactam antibiotics represent 40% thus playing a crucial role in the management of infections treatment. We report a small series of phenylboronic acids derivatives (BAs) active against class A carbapenemases KPC-2 and GES-5, and class C cephalosporinases AmpC. The inhibitory profile of our BAs against class A and C was investigated by means of molecular docking, enzyme kinetics and X-ray crystallography. We were interested in the mechanism of recognition among class A and class C to direct the design of broad serine β-Lactamases (SBLs) inhibitors. Molecular modeling calculations vs GES-5 and crystallographic studies vs AmpC reasoned, respectively, the ortho derivative 2 and the meta derivative 3 binding affinity. The ability of our BAs to protect β-lactams from BLs hydrolysis was determined in biological assays conducted against clinical strains: Fractional inhibitory concentration index (FICI) tests confirmed their ability to be synergic with β-lactams thus restoring susceptibility to meropenem. Considering the obtained results and the lack of cytotoxicity, our derivatives represent validated probe for the design of SBLs inhibitors.
Keyphrases
- molecular docking
- infectious diseases
- molecular dynamics simulations
- magnetic resonance imaging
- staphylococcus aureus
- escherichia coli
- high resolution
- klebsiella pneumoniae
- single molecule
- magnetic resonance
- molecular dynamics
- combination therapy
- high throughput
- bone marrow
- binding protein
- stem cells
- dna binding
- smoking cessation
- living cells
- dual energy
- contrast enhanced
- monte carlo
- water soluble