Binding of the substrate analog methanol in the oxygen-evolving complex of photosystem II in the D1-N87A genetic variant of cyanobacteria.
Vidmantas KalendraKrystle M ReissGourab BanerjeeIpsita GhoshAmgalanbaatar BaldansurenVictor S BatistaGary W BrudvigK V LakshmiPublished in: Faraday discussions (2022)
The solar water-splitting protein complex, photosystem II (PSII), catalyzes one of the most energetically demanding reactions in nature by using light energy to drive a catalyst capable of oxidizing water. The water oxidation reaction is catalyzed at the Mn 4 Ca-oxo cluster in the oxygen-evolving complex (OEC), which cycles through five light-driven S-state intermediates (S 0 -S 4 ). A detailed mechanism of the reaction remains elusive as it requires knowledge of the delivery and binding of substrate water in the higher S-state intermediates. In this study, we use two-dimensional (2D) hyperfine sublevel correlation spectroscopy, in conjunction with quantum mechanics/molecular mechanics (QM/MM) and density functional theory (DFT), to probe the binding of the substrate analog, methanol, in the S 2 state of the D1-N87A variant of PSII from Synechocystis sp. PCC 6803. The results indicate that the size and specificity of the "narrow" channel is altered in D1-N87A PSII, allowing for the binding of deprotonated 13 C-labeled methanol at the Mn4(IV) ion of the catalytic cluster in the S 2 state. This has important implications on the mechanistic models for water oxidation in PSII.
Keyphrases
- density functional theory
- electron transfer
- room temperature
- molecular dynamics
- carbon dioxide
- binding protein
- dna binding
- healthcare
- amino acid
- hydrogen peroxide
- high resolution
- energy transfer
- ionic liquid
- molecular docking
- metal organic framework
- computed tomography
- protein protein
- living cells
- gene expression
- pet ct
- visible light
- mass spectrometry
- fluorescent probe