Model discovery approach enables noninvasive measurement of intra-tumoral fluid transport in dynamic MRI.
Ryan T WoodallCora C EsparzaMargarita GutovaMaosen WangJessica J CunninghamAlexander Byers BrummerCaleb A StineChristine C BrownJennifer M MunsonRussell C RocknePublished in: APL bioengineering (2024)
Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is a routine method to noninvasively quantify perfusion dynamics in tissues. The standard practice for analyzing DCE-MRI data is to fit an ordinary differential equation to each voxel. Recent advances in data science provide an opportunity to move beyond existing methods to obtain more accurate measurements of fluid properties. Here, we developed a localized convolutional function regression that enables simultaneous measurement of interstitial fluid velocity, diffusion, and perfusion in 3D. We validated the method computationally and experimentally, demonstrating accurate measurement of fluid dynamics in situ and in vivo . Applying the method to human MRIs, we observed tissue-specific differences in fluid dynamics, with an increased fluid velocity in breast cancer as compared to brain cancer. Overall, our method represents an improved strategy for studying interstitial flows and interstitial transport in tumors and patients. We expect that our method will contribute to the better understanding of cancer progression and therapeutic response.
Keyphrases
- contrast enhanced
- magnetic resonance imaging
- computed tomography
- end stage renal disease
- diffusion weighted imaging
- magnetic resonance
- papillary thyroid
- chronic kidney disease
- healthcare
- primary care
- endothelial cells
- gene expression
- high resolution
- big data
- newly diagnosed
- electronic health record
- public health
- peritoneal dialysis
- small molecule
- ejection fraction
- white matter
- squamous cell
- prognostic factors
- mass spectrometry
- multiple sclerosis
- blood brain barrier
- blood flow
- machine learning
- childhood cancer
- cerebral ischemia
- data analysis