Development of innovative multi-epitope mRNA vaccine against Pseudomonas aeruginosa using in silico approaches.
Maryam AsadinezhadSaeed KhoshnoodParisa AsadollahiSobhan GhafourianNourkhoda SadeghifardIraj PakzadYasaman ZeinivandNazanin OmidiAli HematianBehrooz Sadeghi KalaniPublished in: Briefings in bioinformatics (2024)
The rising issue of antibiotic resistance has made treating Pseudomonas aeruginosa infections increasingly challenging. Therefore, vaccines have emerged as a viable alternative to antibiotics for preventing P. aeruginosa infections in susceptible individuals. With its superior accuracy, high efficiency in stimulating cellular and humoral immune responses, and low cost, mRNA vaccine technology is quickly replacing traditional methods. This study aimed to design a novel mRNA vaccine by using in silico approaches against P. aeruginosa. The research team identified five surface and antigenic proteins and selected their appropriate epitopes with immunoinformatic tools. These epitopes were then examined for toxicity, allergenicity and homology. The researchers also checked their presentation and identification by major histocompatibility complex cells and other immune cells through valuable tools like molecular docking. They subsequently modeled a multi-epitope protein and optimized it. The mRNA was analyzed in terms of structure and stability, after which the immune system's response against the new vaccine was simulated. The results indicated that the designed mRNA construct could be an effective and promising vaccine that requires laboratory and clinical trials.
Keyphrases
- molecular docking
- pseudomonas aeruginosa
- immune response
- binding protein
- low cost
- clinical trial
- high efficiency
- cystic fibrosis
- oxidative stress
- biofilm formation
- escherichia coli
- toll like receptor
- small molecule
- inflammatory response
- cell proliferation
- signaling pathway
- cell death
- protein protein
- staphylococcus aureus
- phase ii