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Massively parallel single-nucleotide mutagenesis using reversibly terminated inosine.

Gabe HallerDavid AlvaradoKevin McCallRobi D MitraMatthew B DobbsChristina A Gurnett
Published in: Nature methods (2016)
Large-scale mutagenesis of target DNA sequences allows researchers to comprehensively assess the effects of single-nucleotide changes. Here we demonstrate the construction of a systematic allelic series (SAS) using massively parallel single-nucleotide mutagenesis with reversibly terminated deoxyinosine triphosphates (rtITP). We created a mutational library containing every possible single-nucleotide mutation surrounding the active site of the TEM-1 β-lactamase gene. When combined with high-throughput functional assays, SAS mutational libraries can expedite the functional assessment of genetic variation.
Keyphrases
  • high throughput
  • crispr cas
  • escherichia coli
  • multidrug resistant
  • single cell
  • klebsiella pneumoniae
  • gram negative
  • nucleic acid