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Camera trap surveys of Atlantic Forest mammals: A data set for analyses considering imperfect detection (2004-2020).

Ingridi Camboim FranceschiRubem Augusto da Paixão DornasIsabel Salgueiro LermenArtur Vicente Pfeifer CoelhoAdemir Henrique Vilas BoasAdriano Garcia ChiarelloAdriano Pereira PagliaAgnis Cristiane de SouzaAlana Rafaela BorsekowskyAlessandro RochaAlex BagerAlexander Zaidan de SouzaAlexandre Martins Costa LopesAloysio Souza de MouraAluane Silva FerreiraAlvaro García-OlaecheaAna Cláudia DelciellosAna Elisa de Faria BacellarAna Kellen Nogueira CampeloAna Maria de Oliveira PaschoalAnderson Claudino RolimAndré Luiz Ferreira da SilvaAndré Monnerat LannaAndré Pereira da SilvaAndresa GuimarãesÂngela CardosoAngelica Soligo CassolAnna Ludmilla da Costa-PintoAriel Guilherme Santos do NascimentoArthur Soares FernandesAryanne ClyviaAureo Banhos Dos SantosBarbara Lima-SilvaBeatriz de Mello BeisiegelBeatriz Fernandes Lima LucianoBernardo de Faria LeopoldoBruna Nunes KrobelBruno Busnello KubiakBruno Henrique SaranholiBruno Senna CorreaCaio Sant Anna TeixeiraCamila Rezende AyrozaCamila Righetto 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SpagnolRaone Beltrão-MendesRavi Fernandes MarianoRenata Reinoso RochaRenata Sousa-LimaRenata Valls PagottoRhayssa Terra de FariaRicardo Corassa ArraisRicardo MoratelliRicardo SartorelloRita de Cassia BianchiRoberto de Carvalho GuimarãesRodrigo Lima MassaraRomulo Theodoro CostaRosane Vieira MarquesRuan Márcio Ruas NunesSandra Maria HartzSaulo Meneses Silvestre de SousaSaulo Ramos LimaSergio Lutz BarbosaSilvia Neri GodoyStephen Francis FerrariTalita Guimarães de Araújo-PiovezanTalita Laura GóesTatiane Campos TrigoThales R O de FreitasThiago Bernardes MaccariniThiago Marcial de CastroThiago Ribas BellaTonny Marques de Oliveira JuniorUslaine Maciel CunhaVanessa Tavares KanaanVera PfannerstillVictor Siqueira PimentelVilmar Picinatto FilhoVinícius Nunes AlvesViviana B Rojas BonziViviane MottinVlamir José RochaAndreas KindelIgor Pfeifer Coelho
Published in: Ecology (2024)
Camera traps became the main observational method of a myriad of species over large areas. Data sets from camera traps can be used to describe the patterns and monitor the occupancy, abundance, and richness of wildlife, essential information for conservation in times of rapid climate and land-cover changes. Habitat loss and poaching are responsible for historical population losses of mammals in the Atlantic Forest biodiversity hotspot, especially for medium to large-sized species. Here we present a data set from camera trap surveys of medium to large-sized native mammals (>1 kg) across the Atlantic Forest. We compiled data from 5380 ground-level camera trap deployments in 3046 locations, from 2004 to 2020, resulting in 43,068 records of 58 species. These data add to existing data sets of mammals in the Atlantic Forest by including dates of camera operation needed for analyses dealing with imperfect detection. We also included, when available, information on important predictors of detection, namely the camera brand and model, use of bait, and obstruction of camera viewshed that can be measured from example pictures at each camera location. Besides its application in studies on the patterns and mechanisms behind occupancy, relative abundance, richness, and detection, the data set presented here can be used to study species' daily activity patterns, activity levels, and spatiotemporal interactions between species. Moreover, data can be used combined with other data sources in the multiple and expanding uses of integrated population modeling. An R script is available to view summaries of the data set. We expect that this data set will be used to advance the knowledge of mammal assemblages and to inform evidence-based solutions for the conservation of the Atlantic Forest. The data are not copyright restricted; please cite this paper when using the data.
Keyphrases
  • electronic health record
  • climate change
  • big data
  • high speed
  • convolutional neural network
  • data analysis
  • machine learning
  • deep learning
  • mass spectrometry
  • quantum dots
  • high resolution