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Ribose and Non-Ribose A2A Adenosine Receptor Agonists: Do They Share the Same Receptor Recognition Mechanism?

Giovanni BolcatoMatteo PavanDavide BassaniMattia SturleseStefano Moro
Published in: Biomedicines (2022)
Adenosine receptors have been a promising class of targets for the development of new therapies for several diseases. In recent years, a renewed interest in this field has risen, thanks to the implementation of a novel class of agonists that lack the ribose moiety, once considered essential for the agonistic profile. Recently, an X-ray crystal structure of the A 2A adenosine receptor has been solved, providing insights about the receptor activation from this novel class of agonists. Starting from this structural information, we have performed supervised molecular dynamics (SuMD) simulations to investigate the binding pathway of a non-nucleoside adenosine receptor agonist as well as one of three classic agonists. Furthermore, we analyzed the possible role of water molecules in receptor activation.
Keyphrases
  • molecular dynamics
  • protein kinase
  • healthcare
  • machine learning
  • binding protein
  • primary care
  • density functional theory
  • high resolution
  • magnetic resonance imaging
  • magnetic resonance
  • mass spectrometry