IPCAPS: an R package for iterative pruning to capture population structure.

Kridsadakorn ChaichoompuFentaw AbegazSissades TongsimaPhilip James ShawAnavaj SakuntabhaiLuísa PereiraKristel Van Steen

Published in: Source code for biology and medicine (2019)

IPCAPS supports different measurement scales for variables used to identify substructure. Hence, panels of gene expression and methylation data can be accommodated as well. The tool can also be applied in patient sub-phenotyping contexts. IPCAPS is developed in R and is freely available from http://bio3.giga.ulg.ac.be/ipcaps.

Keyphrases

gene expression
dna methylation
case report
genome wide
electronic health record
high throughput
image quality
big data
computed tomography
data analysis
dual energy
deep learning