A Leap Forward Towards Unraveling Newer Anti-infective Agents from an Unconventional Source: a Draft Genome Sequence Illuminating the Future Promise of Marine Heterotrophic Bacillus sp. Against Drug-Resistant Pathogens.
Kajal ChakrabortyVinaya Kizhakkepatt KizhakkekalamMinju JoyRekha Devi ChakrabortyPublished in: Marine biotechnology (New York, N.Y.) (2021)
During the previous decade, genome-built researches on marine heterotrophic microorganisms displayed the chemical heterogeneity of natural product resources coupled with the efficacies of harnessing the genetic divergence in various strains. Herein, we describe the whole genome data of heterotrophic Bacillus amyloliquefaciens MB6 (MTCC 12,716), isolated from a marine macroalga Hypnea valentiae, a 4,107,511-bp circular chromosome comprising 186 contigs, with 4154 protein-coding DNA sequences and a coding ratio of 86%. Simultaneously, bioactivity-guided purification of the bacterial extract resulted in six polyketide classes of compounds with promising antibacterial activity. Draft genome sequence of B. amyloliquefaciens MB6 unveiled biosynthetic gene clusters (BGCs) engaged in the biosynthesis of polyketide-originated macrolactones with prospective antagonistic activity (MIC ≤ 5 µg/mL) against nosocomial pathogens. Genome analysis manifested 34 putative BGCs necessitated to synthesize biologically active polyketide-originated frameworks or their derivatives. These results provide insights into the genetic basis of heterotrophic B. amyloliquefaciens MTCC 12,716 as a prospective lead for biotechnological and pharmaceutical applications.
Keyphrases
- genome wide
- drug resistant
- copy number
- acinetobacter baumannii
- multidrug resistant
- gram negative
- big data
- dna methylation
- escherichia coli
- antimicrobial resistance
- oxidative stress
- single cell
- electronic health record
- bacillus subtilis
- klebsiella pneumoniae
- cell free
- current status
- artificial intelligence
- machine learning
- small molecule
- staphylococcus aureus
- cell wall