Login / Signup

Satellite DNA in Paphiopedilum subgenus Parvisepalum as revealed by high-throughput sequencing and fluorescent in situ hybridization.

Yung-I LeeJing Wei YapShairul IzanIlia J LeitchMichael F FayYi-Ching LeeOriane HidalgoSteven DodsworthMarinus J M SmuldersBarbara GravendeelAndrew R Leitch
Published in: BMC genomics (2018)
We conclude that the newly discovered, highly abundant and rapidly evolving satellite sequence SatA is specific to Paphiopedilum subgenus Parvisepalum. SatA and rDNA chromosomal distributions are characteristic of species, and comparisons between species reveal that the distribution patterns generate a strong phylogenetic signal. We also conclude that the ancestral chromosome number of subgenus Parvisepalum and indeed of all Paphiopedilum could be either 2n = 26 or 28, if P. vietnamense is sister to all species in the subgenus as suggested by the ITS data.
Keyphrases
  • high throughput sequencing
  • copy number
  • genetic diversity
  • electronic health record
  • quantum dots
  • single cell
  • machine learning
  • gene expression
  • artificial intelligence
  • amino acid
  • data analysis