Frustration Dynamics and Electron-Transfer Reorganization Energies in Wild-Type and Mutant Azurins.
Xun ChenMingchen ChenPeter G WolynesPernilla Wittung-StafshedeHarry B GrayPublished in: Journal of the American Chemical Society (2022)
Long-range electron tunneling through metalloproteins is facilitated by evolutionary tuning of donor-acceptor electronic couplings, formal electrochemical potentials, and active-site reorganization energies. Although the minimal frustration of the folding landscape enables this tuning, residual frustration in the vicinity of the metallocofactor can allow conformational fluctuations required for protein function. We show here that the constrained copper site in wild-type azurin is governed by an intricate pattern of minimally frustrated local and distant interactions that together enable rapid electron flow to and from the protein. In contrast, sluggish electron transfer reactions (unfavorable reorganization energies) of active-site azurin variants are attributable to increased frustration near to as well as distant from the copper site, along with an exaggerated oxidation-state dependence of both minimally and highly frustrated interaction patterns.
Keyphrases
- electron transfer
- wild type
- density functional theory
- lymph node
- single molecule
- molecular dynamics
- molecular dynamics simulations
- protein protein
- magnetic resonance
- amino acid
- binding protein
- copy number
- genome wide
- oxide nanoparticles
- single cell
- magnetic resonance imaging
- gene expression
- computed tomography
- gold nanoparticles
- dna methylation
- contrast enhanced
- quantum dots