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De novo transcriptome assembly, functional annotation and differential gene expression analysis of juvenile and adult E. fetida, a model oligochaete used in ecotoxicological studies.

Michelle ThundersJo CavanaghYinsheng Li
Published in: Biological research (2017)
These data have been made publicly available, and to our knowledge represent the most comprehensive available transcriptome for E. fetida assembled from RNA sequencing data. This provides important groundwork for subsequent ecotoxicogenomic studies exploring the impact of the environment on global gene expression in E. fetida and other earthworm species.
Keyphrases
  • gene expression
  • single cell
  • rna seq
  • dna methylation
  • electronic health record
  • case control
  • healthcare
  • big data
  • genome wide
  • data analysis
  • young adults
  • artificial intelligence
  • genetic diversity