Unusual p K a Values Mediate the Self-Assembly of Spider Dragline Silk Proteins.
Nur Alia OktavianiAli D MalayAkimasa MatsugamiFumiaki HayashiKeiji NumataPublished in: Biomacromolecules (2023)
Spider dragline silk is a remarkably tough biomaterial and composed primarily of spidroins MaSp1 and MaSp2. During fiber self-assembly, the spidroin N-terminal domains (NTDs) undergo rapid dimerization in response to a pH gradient. However, obtaining a detailed understanding of this mechanism has been hampered by a lack of direct evidence regarding the protonation states of key ionic residues. Here, we elucidated the solution structures of MaSp1 and MaSp2 NTDs from Trichonephila clavipes and determined the experimental p K a values of conserved residues involved in dimerization using NMR. Surprisingly, we found that the Asp40 located on an acidic cluster protonates at an unusually high pH (∼6.5-7.1), suggesting the first step in the pH response. Then, protonation of Glu119 and Glu79 follows, with p K a s above their intrinsic values, contributing toward stable dimer formation. We propose that exploiting the atypical p K a values is a strategy to achieve tight spatiotemporal control of spider silk self-assembly.