Automated generation of genome-scale metabolic draft reconstructions based on KEGG.
Emil KarlsenChristian SchulzEivind AlmaasPublished in: BMC bioinformatics (2018)
AutoKEGGRec provides a first step in a metabolic network reconstruction process, filling a gap for tools creating community and consolidated metabolic networks. Based only on KEGG data as external input, the generated reconstructions consist of data with a directly traceable foundation and pedigree. With AutoKEGGRec, this kind of modeling is made accessible to a wider part of the genome-scale metabolic analysis community.