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Interplay between Mg 2+ and Ca 2+ at multiple sites of the ryanodine receptor.

Ashok R NayakWarin RangubpitAlex H WillYifan HuPablo Castro-HartmannJoshua J LoboKelly DrydenGraham D LambPornthep SompornpisutMontserrat Samsó
Published in: Nature communications (2024)
RyR1 is an intracellular Ca 2+ channel important in excitable cells such as neurons and muscle fibers. Ca 2+ activates it at low concentrations and inhibits it at high concentrations. Mg 2+ is the main physiological RyR1 inhibitor, an effect that is overridden upon activation. Despite the significance of Mg 2+ -mediated inhibition, the molecular-level mechanisms remain unclear. In this work we determined two cryo-EM structures of RyR1 with Mg 2+ up to 2.8 Å resolution, identifying multiple Mg 2+ binding sites. Mg 2+ inhibits at the known Ca 2+ activating site and we propose that the EF hand domain is an inhibitory divalent cation sensor. Both divalent cations bind to ATP within a crevice, contributing to the precise transmission of allosteric changes within the enormous channel protein. Notably, Mg 2+ inhibits RyR1 by interacting with the gating helices as validated by molecular dynamics. This structural insight enhances our understanding of how Mg 2+ inhibition is overcome during excitation.
Keyphrases
  • molecular dynamics
  • protein kinase
  • small molecule
  • ionic liquid
  • skeletal muscle
  • spinal cord injury
  • density functional theory
  • oxidative stress
  • cell death
  • cell cycle arrest