An update on current and novel molecular diagnostics for the diagnosis of invasive fungal infections.
Jeffrey D JenksP Lewis WhiteSarah Elizabeth KiddTyler GoshiaStephanie I FraleyMartin HoeniglGeorge R ThompsonPublished in: Expert review of molecular diagnostics (2023)
PCR is highly sensitive and specific, although performance can be impacted by prior/concurrent antifungal use. PCR assays can identify mutations associated with antifungal resistance, non-Aspergillus mold infections, and infections from endemic fungi. HRM is a rapid and highly-sensitive diagnostic modality that can identify a wide range of fungal pathogens, including down to the species level, but multiplex assays are limited and HRM is currently unavailable in most healthcare settings, although universal HRM is working to overcome this limitation. mNGS offers a promising approach for rapid and hypothesis-free diagnosis of a wide range of fungal pathogens, although some drawbacks include limited access, variable performance across platforms, the expertise and costs associated with this method, and long turnaround times in real-world settings.