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Construction of Biocatalysts Using the P450 Scaffold for the Synthesis of Indigo from Indole.

Yanqing LiYing-Wu LinFang WangJinghan WangOsami ShojiJia-Kun Xu
Published in: International journal of molecular sciences (2023)
With the increasing demand for blue dyes, it is of vital importance to develop a green and efficient biocatalyst to produce indigo. This study constructed a hydrogen peroxide-dependent catalytic system for the direct conversion of indole to indigo using P450BM3 with the assistance of dual-functional small molecules (DFSM). The arrangements of amino acids at 78, 87, and 268 positions influenced the catalytic activity. F87G/T268V mutant gave the highest catalytic activity with k cat of 1402 min -1 and with a yield of 73%. F87A/T268V mutant was found to produce the indigo product with chemoselectivity as high as 80%. Moreover, F87G/T268A mutant was found to efficiently catalyze indole oxidation with higher activity ( k cat /K m = 1388 mM -1 min -1 ) than other enzymes, such as the NADPH-dependent P450BM3 (2.4-fold), the Ngb (32-fold) and the Mb (117-fold). Computer simulation results indicate that the arrangements of amino acid residues in the active site can significantly affect the catalytic activity of the protein. The DFSM-facilitated P450BM3 peroxygenase system provides an alternative, simple approach for a key step in the bioproduction of indigo.
Keyphrases
  • amino acid
  • hydrogen peroxide
  • nitric oxide
  • wild type
  • deep learning
  • machine learning
  • wastewater treatment
  • reactive oxygen species
  • small molecule
  • binding protein