Comparison of Blood-Based Shotgun and Targeted Metagenomic Sequencing for Microbiological Diagnosis of Infective Endocarditis.

Laure Flurin Cody R FisherMatthew J WolfBobbi S Pritt Daniel C DeSimone Robin Patel

Published in: Open forum infectious diseases (2023)

The Karius test and tMGS yielded comparable detection rates; however, beyond organism identification, the Karius test generated potentially useful antibiotic resistance data.

Keyphrases

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loop mediated isothermal amplification
real time pcr
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deep learning