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Binding Pockets in Proteins Induced by Mechanical Stress.

Matteo TibertiBob-Dan LechnerArianna Fornili
Published in: Journal of chemical theory and computation (2018)
We report the first observation of a pocket that opens as a result of a mechanical force applied to an Ig-like domain from the cardiac muscle. This previously unseen mechanism of pocket formation is revealed by molecular dynamics simulations under force. Preliminary investigations show that this "mechano-pocket" is potentially druggable and could be found in other domains from the same fold family, suggesting the existence of a general mechanism of pocket formation under mechanical stress.
Keyphrases
  • molecular dynamics simulations
  • single molecule
  • molecular docking
  • skeletal muscle
  • stress induced
  • heart failure
  • dna binding
  • binding protein