Optofluidic time-stretch imaging flow cytometry with a real-time storage rate beyond 5.9 GB/s.
Dan HouJiehua ZhouRuidong XiaoKaining YangYan DingDu WangGuoqiang WuCheng LeiPublished in: Cytometry. Part A : the journal of the International Society for Analytical Cytology (2024)
Optofluidic time-stretch imaging flow cytometry (OTS-IFC) provides a suitable solution for high-precision cell analysis and high-sensitivity detection of rare cells due to its high-throughput and continuous image acquisition. However, transferring and storing continuous big data streams remains a challenge. In this study, we designed a high-speed streaming storage strategy to store OTS-IFC data in real-time, overcoming the imbalance between the fast generation speed in the data acquisition and processing subsystem and the comparatively slower storage speed in the transmission and storage subsystem. This strategy, utilizing an asynchronous buffer structure built on the producer-consumer model, optimizes memory usage for enhanced data throughput and stability. We evaluated the storage performance of the high-speed streaming storage strategy in ultra-large-scale blood cell imaging on a common commercial device. The experimental results show that it can provide a continuous data throughput of up to 5891 MB/s.
Keyphrases
- big data
- high speed
- flow cytometry
- high resolution
- electronic health record
- artificial intelligence
- atomic force microscopy
- high throughput
- machine learning
- single cell
- cell therapy
- deep learning
- healthcare
- data analysis
- working memory
- cell death
- oxidative stress
- cell cycle arrest
- fluorescence imaging
- single molecule
- endoplasmic reticulum stress