Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces.
Zhi-Ping LiuShutang LiuRuitang ChenXiaopeng HuangLing-Yun WuPublished in: BMC bioinformatics (2017)
Large-scale RNA-binding pockets on protein surfaces are grouped by measuring their structural similarities. This similarity network-based framework provides a convenient method for modeling the structural relationships of functional pockets. The local structural patterns identified serve as structure motifs for the recognition with RNA on protein surfaces.